No. words: 1302; after pruning: 1276


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.3 (1,1:598)  589  0.00 0.00 0.17  BE495175Sn27P095H06P078A091F1_085.ab1        1   599 (40)  C BE495175Sn27P095H06P078A091R1_085.ab1   (65)   598     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1  C BE495175Sn27P095H06P078A091R1_085.ab1   663 
  165    BE495175Sn27P095H06P078A091F1_085.ab1   100 
  169  C BE495175Sn27P095H06P078A091R1_085.ab1   495 
  177    BE495175Sn27P095H06P078A091F1_085.ab1   112 
  181  C BE495175Sn27P095H06P078A091R1_085.ab1   483 
  513    BE495175Sn27P095H06P078A091F1_085.ab1   448 
  521  C BE495175Sn27P095H06P078A091R1_085.ab1   143 
  565    BE495175Sn27P095H06P078A091F1_085.ab1   500 
  581  C BE495175Sn27P095H06P078A091R1_085.ab1    83 
  601    BE495175Sn27P095H06P078A091F1_085.ab1   536 
  613  C BE495175Sn27P095H06P078A091R1_085.ab1    51 
  617    BE495175Sn27P095H06P078A091F1_085.ab1   552 
Contig length: old 703, new 704

Contig length: old 704, new 704
New start: 0