No. words: 1335; after pruning: 1309


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 12.2 (1,1:632)  613  0.00 0.16 0.16  BE495175Sn28P095H06P078A091F1_086.ab1        5   633 (35)  C BE495175Sn28P095H06P078A091R1_086.ab1   (38)   629     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1  C BE495175Sn28P095H06P078A091R1_086.ab1   667 
   79    BE495175Sn28P095H06P078A091F1_086.ab1    44 
   83  C BE495175Sn28P095H06P078A091R1_086.ab1   585 
   95    BE495175Sn28P095H06P078A091F1_086.ab1    60 
   99  C BE495175Sn28P095H06P078A091R1_086.ab1   569 
  115    BE495175Sn28P095H06P078A091F1_086.ab1    80 
  123  C BE495175Sn28P095H06P078A091R1_086.ab1   545 
  215    BE495175Sn28P095H06P078A091F1_086.ab1   180 
  219  C BE495175Sn28P095H06P078A091R1_086.ab1   449 
  315    BE495175Sn28P095H06P078A091F1_086.ab1   280 
  319  C BE495175Sn28P095H06P078A091R1_086.ab1   349 
  491    BE495175Sn28P095H06P078A091F1_086.ab1   456 
  495  C BE495175Sn28P095H06P078A091R1_086.ab1   173 
  511    BE495175Sn28P095H06P078A091F1_086.ab1   476 
  531  C BE495175Sn28P095H06P078A091R1_086.ab1   137 
  547    BE495175Sn28P095H06P078A091F1_086.ab1   512 
  555  C BE495175Sn28P095H06P078A091R1_086.ab1   113 
  563    BE495175Sn28P095H06P078A091F1_086.ab1   528 
  571  C BE495175Sn28P095H06P078A091R1_086.ab1    97 
  575    BE495175Sn28P095H06P078A091F1_086.ab1   540 
  583  C BE495175Sn28P095H06P078A091R1_086.ab1    85 
  599    BE495175Sn28P095H06P078A091F1_086.ab1   564 
  611  C BE495175Sn28P095H06P078A091R1_086.ab1    57 
  615    BE495175Sn28P095H06P078A091F1_086.ab1   580 
  639  C BE495175Sn28P095H06P078A091R1_086.ab1    29 
  643    BE495175Sn28P095H06P078A091F1_086.ab1   608 
Contig length: old 702, new 703

Contig length: old 703, new 703
New start: 0