No. words: 1322; after pruning: 1296


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 12.2 (1,1:618)  604  0.00 0.00 0.16  BE495175Sn29P095H06P078A091F1_083.ab1        4   619 (41)  C BE495175Sn29P095H06P078A091R1_083.ab1   (47)   615     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C BE495175Sn29P095H06P078A091R1_083.ab1   662 
  175    BE495175Sn29P095H06P078A091F1_083.ab1   131 
  179  C BE495175Sn29P095H06P078A091R1_083.ab1   484 
  511    BE495175Sn29P095H06P078A091F1_083.ab1   467 
  527  C BE495175Sn29P095H06P078A091R1_083.ab1   136 
  559    BE495175Sn29P095H06P078A091F1_083.ab1   515 
  579  C BE495175Sn29P095H06P078A091R1_083.ab1    84 
  599    BE495175Sn29P095H06P078A091F1_083.ab1   555 
  623  C BE495175Sn29P095H06P078A091R1_083.ab1    40 
  627    BE495175Sn29P095H06P078A091F1_083.ab1   583 
  639  C BE495175Sn29P095H06P078A091R1_083.ab1    24 
  643    BE495175Sn29P095H06P078A091F1_083.ab1   599 
Contig length: old 703, new 704

Contig length: old 704, new 704
New start: 0