No. words: 1322; after pruning: 1296


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 12.2 (1,1:617)  593  0.33 0.16 0.16  BE495175Sn32P095H06P078A091F1_084.ab1        4   618 (42)  C BE495175Sn32P095H06P078A091R1_084.ab1   (47)   615     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  298 nodes

 151 str. conn. components

Path
    1  C BE495175Sn32P095H06P078A091R1_084.ab1   662 
  491    BE495175Sn32P095H06P078A091F1_084.ab1   446 
  499  C BE495175Sn32P095H06P078A091R1_084.ab1   164 
  511    BE495175Sn32P095H06P078A091F1_084.ab1   466 
  531  C BE495175Sn32P095H06P078A091R1_084.ab1   132 
  539    BE495175Sn32P095H06P078A091F1_084.ab1   494 
  555  C BE495175Sn32P095H06P078A091R1_084.ab1   108 
  559    BE495175Sn32P095H06P078A091F1_084.ab1   514 
  579  C BE495175Sn32P095H06P078A091R1_084.ab1    84 
  607    BE495175Sn32P095H06P078A091F1_084.ab1   562 
  611  C BE495175Sn32P095H06P078A091R1_084.ab1    52 
  615    BE495175Sn32P095H06P078A091F1_084.ab1   570 
  639  C BE495175Sn32P095H06P078A091R1_084.ab1    24 
  643    BE495175Sn32P095H06P078A091F1_084.ab1   598 
Contig length: old 704, new 705

Contig length: old 705, new 705
New start: 0