No. words: 1316; after pruning: 1290


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.6 (1,1:614)  603  0.00 0.00 0.16  BE495175Ta11P095H06P078A091F1_069.ab1        1   615 (37)  C BE495175Ta11P095H06P078A091R1_069.ab1   (50)   614     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C BE495175Ta11P095H06P078A091R1_069.ab1   664 
  514    BE495175Ta11P095H06P078A091F1_069.ab1   464 
  526  C BE495175Ta11P095H06P078A091R1_069.ab1   139 
  558    BE495175Ta11P095H06P078A091F1_069.ab1   508 
  594  C BE495175Ta11P095H06P078A091R1_069.ab1    71 
  602    BE495175Ta11P095H06P078A091F1_069.ab1   552 
  610  C BE495175Ta11P095H06P078A091R1_069.ab1    55 
  618    BE495175Ta11P095H06P078A091F1_069.ab1   568 
Contig length: old 701, new 702

Contig length: old 702, new 702
New start: 0