No. words: 1326; after pruning: 1300


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:622)  607  0.00 0.16 0.16  BE495175Ta12P095H06P078A091F1_070.ab1        1   623 (39)  C BE495175Ta12P095H06P078A091R1_070.ab1   (41)   623     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C BE495175Ta12P095H06P078A091R1_070.ab1   664 
   77    BE495175Ta12P095H06P078A091F1_070.ab1    35 
   85  C BE495175Ta12P095H06P078A091R1_070.ab1   580 
  165    BE495175Ta12P095H06P078A091F1_070.ab1   123 
  181  C BE495175Ta12P095H06P078A091R1_070.ab1   484 
  513    BE495175Ta12P095H06P078A091F1_070.ab1   471 
  529  C BE495175Ta12P095H06P078A091R1_070.ab1   136 
  561    BE495175Ta12P095H06P078A091F1_070.ab1   519 
  577  C BE495175Ta12P095H06P078A091R1_070.ab1    88 
  601    BE495175Ta12P095H06P078A091F1_070.ab1   559 
  613  C BE495175Ta12P095H06P078A091R1_070.ab1    52 
  629    BE495175Ta12P095H06P078A091F1_070.ab1   587 
  641  C BE495175Ta12P095H06P078A091R1_070.ab1    24 
  645    BE495175Ta12P095H06P078A091F1_070.ab1   603 
Contig length: old 703, new 704

Contig length: old 704, new 704
New start: 0