No. words: 1068; after pruning: 1042


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.8 (1,1:487)  481  0.00 0.00 0.00  BE495175Ta13P095B07P078A091F1_045.ab1        1   488 (42)  C BE495175Ta13P095B07P078A091R1_045.ab1   (50)   488     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C BE495175Ta13P095B07P078A091R1_045.ab1   538 
  382    BE495175Ta13P095B07P078A091F1_045.ab1   332 
  446  C BE495175Ta13P095B07P078A091R1_045.ab1    93 
  458    BE495175Ta13P095B07P078A091F1_045.ab1   408 
Contig length: old 580, new 580

Contig length: old 580, new 580
New start: 0