No. words: 1334; after pruning: 1308


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:628)  609  0.00 0.32 0.16  BE495175Ta14P095H06P078A091F1_068.ab1        1   629 (42)  C BE495175Ta14P095H06P078A091R1_068.ab1   (33)   630     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C BE495175Ta14P095H06P078A091R1_068.ab1   663 
  176    BE495175Ta14P095H06P078A091F1_068.ab1   141 
  188  C BE495175Ta14P095H06P078A091R1_068.ab1   476 
  512    BE495175Ta14P095H06P078A091F1_068.ab1   477 
  528  C BE495175Ta14P095H06P078A091R1_068.ab1   136 
  568    BE495175Ta14P095H06P078A091F1_068.ab1   533 
  584  C BE495175Ta14P095H06P078A091R1_068.ab1    80 
  600    BE495175Ta14P095H06P078A091F1_068.ab1   565 
  612  C BE495175Ta14P095H06P078A091R1_068.ab1    52 
  628    BE495175Ta14P095H06P078A091F1_068.ab1   593 
  640  C BE495175Ta14P095H06P078A091R1_068.ab1    24 
  644    BE495175Ta14P095H06P078A091F1_068.ab1   609 
Contig length: old 705, new 706

Contig length: old 706, new 706
New start: 0