No. words: 1078; after pruning: 1052


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 10.6 (1,1:503)  496  0.00 0.00 0.00  BE495175Ta18P095B07P078A091F1_042.ab1        2   504 (40)  C BE495175Ta18P095B07P078A091R1_042.ab1   (31)   503     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C BE495175Ta18P095B07P078A091R1_042.ab1   534 
  381    BE495175Ta18P095B07P078A091F1_042.ab1   351 
Contig length: old 574, new 574

Contig length: old 574, new 574
New start: 0