No. words: 1127; after pruning: 1101


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.2 (1,1:520)  497  0.00 0.39 0.19  BE495175Ta18P095G06P078A091F1_064.ab1        3   520 (46)  C BE495175Ta18P095G06P078A091R1_064.ab1   (41)   520     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C BE495175Ta18P095G06P078A091R1_064.ab1   561 
   72    BE495175Ta18P095G06P078A091F1_064.ab1    32 
   80  C BE495175Ta18P095G06P078A091R1_064.ab1   482 
  136    BE495175Ta18P095G06P078A091F1_064.ab1    96 
  140  C BE495175Ta18P095G06P078A091R1_064.ab1   422 
  416    BE495175Ta18P095G06P078A091F1_064.ab1   376 
Contig length: old 606, new 606

Contig length: old 606, new 606
New start: 0