No. words: 1326; after pruning: 1300


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.7 (1,1:620)  582  1.45 0.00 0.16  BE495175Ta19P095H06P078A091F1_093.ab1        1   621 (38)  C BE495175Ta19P095H06P078A091R1_093.ab1   (47)   620     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C BE495175Ta19P095H06P078A091R1_093.ab1   667 
  512    BE495175Ta19P095H06P078A091F1_093.ab1   465 
  560  C BE495175Ta19P095H06P078A091R1_093.ab1   108 
  564    BE495175Ta19P095H06P078A091F1_093.ab1   517 
  592  C BE495175Ta19P095H06P078A091R1_093.ab1    76 
  600    BE495175Ta19P095H06P078A091F1_093.ab1   553 
  608  C BE495175Ta19P095H06P078A091R1_093.ab1    60 
  624    BE495175Ta19P095H06P078A091F1_093.ab1   577 
Contig length: old 705, new 706

Contig length: old 706, new 706
New start: 0