No. words: 1099; after pruning: 1073


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    3   -0.3 -0.3 (1,1:46)   35  0.00 2.27 2.27  BE495175Ta20P101A06P078A091F1_094.ab1        1    44 (503)  C BE495175Ta20P101A06P078A091R1_094.ab1   (505)    47     4 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.3       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  20 nodes

 12 str. conn. components

Path
    1  C BE495175Ta20P101A06P078A091R1_094.ab1   552 
  519    BE495175Ta20P101A06P078A091F1_094.ab1    13 
Contig length: old 1052, new 1053

Contig length: old 1053, new 1053
New start: 0