No. words: 1316; after pruning: 1290


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.6 (1,1:613)  595  0.16 0.00 0.33  BE495175Td04P095H06P078A091F1_078.ab1        1   615 (40)  C BE495175Td04P095H06P078A091R1_078.ab1   (48)   613     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1  C BE495175Td04P095H06P078A091R1_078.ab1   661 
   76    BE495175Td04P095H06P078A091F1_078.ab1    28 
   80  C BE495175Td04P095H06P078A091R1_078.ab1   582 
   92    BE495175Td04P095H06P078A091F1_078.ab1    44 
  104  C BE495175Td04P095H06P078A091R1_078.ab1   558 
  116    BE495175Td04P095H06P078A091F1_078.ab1    68 
  124  C BE495175Td04P095H06P078A091R1_078.ab1   538 
  164    BE495175Td04P095H06P078A091F1_078.ab1   116 
  172  C BE495175Td04P095H06P078A091R1_078.ab1   490 
  176    BE495175Td04P095H06P078A091F1_078.ab1   128 
  220  C BE495175Td04P095H06P078A091R1_078.ab1   442 
  316    BE495175Td04P095H06P078A091F1_078.ab1   268 
  320  C BE495175Td04P095H06P078A091R1_078.ab1   342 
  512    BE495175Td04P095H06P078A091F1_078.ab1   464 
  528  C BE495175Td04P095H06P078A091R1_078.ab1   134 
  564    BE495175Td04P095H06P078A091F1_078.ab1   516 
  580  C BE495175Td04P095H06P078A091R1_078.ab1    82 
  588    BE495175Td04P095H06P078A091F1_078.ab1   540 
Contig length: old 702, new 703

Contig length: old 703, new 703
New start: 0