No. words: 1331; after pruning: 1305


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 12.3 (1,1:627)  608  0.00 0.16 0.16  BE495175Td07P095H06P078A091F1_073.ab1        5   628 (42)  C BE495175Td07P095H06P078A091R1_073.ab1   (37)   624     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C BE495175Td07P095H06P078A091R1_073.ab1   661 
  510    BE495175Td07P095H06P078A091F1_073.ab1   476 
  526  C BE495175Td07P095H06P078A091R1_073.ab1   136 
  558    BE495175Td07P095H06P078A091F1_073.ab1   524 
  578  C BE495175Td07P095H06P078A091R1_073.ab1    84 
  598    BE495175Td07P095H06P078A091F1_073.ab1   564 
  610  C BE495175Td07P095H06P078A091R1_073.ab1    52 
  622    BE495175Td07P095H06P078A091F1_073.ab1   588 
  638  C BE495175Td07P095H06P078A091R1_073.ab1    24 
  642    BE495175Td07P095H06P078A091F1_073.ab1   608 
Contig length: old 703, new 704

Contig length: old 704, new 704
New start: 0