No. words: 1524; after pruning: 1485


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.1 (1,1:369)  357  0.00 0.00 0.27  BE495304Ld06P016E05E11F1_010.scf        1   370 (134)  C BE495304Ld06P016E05E11R1_010.ab1   (147)   369     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    1    1
    2    1

Chimera merges: 


Contig 1:  184 nodes

 94 str. conn. components

Path
    1  C BE495304Ld06P016E05E11R1_010.ab1   516 
  151    BE495304Ld06P016E05E11F1_010.scf     4 
Contig length: old 650, new 651

Contig length: old 651, new 651
New start: 0