No. words: 1532; after pruning: 1493


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.4 (1,1:376)  364  0.00 0.00 0.27  BE495304Ld08P016E05E11F1_006.scf        1   377 (127)  C BE495304Ld08P016E05E11R1_006.ab1   (148)   376     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    1    1
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1  C BE495304Ld08P016E05E11R1_006.ab1   524 
  152    BE495304Ld08P016E05E11F1_006.scf     4 
Contig length: old 651, new 652

Contig length: old 652, new 652
New start: 0