No. words: 1295; after pruning: 1255


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:615)  600  0.32 0.16 0.00  BE495325Sn24P068G06P019C101F1_085.ab1        1   616 (33)  C BE495325Sn24P068G06P019C101R1_085.ab1   (29)   617     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  300 nodes

 152 str. conn. components

Path
    1  C BE495325Sn24P068G06P019C101R1_085.ab1   646 
   49    BE495325Sn24P068G06P019C101F1_085.ab1    19 
  177  C BE495325Sn24P068G06P019C101R1_085.ab1   470 
  477    BE495325Sn24P068G06P019C101F1_085.ab1   447 
  485  C BE495325Sn24P068G06P019C101R1_085.ab1   162 
  509    BE495325Sn24P068G06P019C101F1_085.ab1   479 
  513  C BE495325Sn24P068G06P019C101R1_085.ab1   134 
  636    BE495325Sn24P068G06P019C101F1_085.ab1   606 
Contig length: old 679, new 679

Contig length: old 679, new 679
New start: 0