No. words: 1287; after pruning: 1247


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:603)  592  0.33 0.00 0.00  BE495325Sn26P068G06P019C101F1_096.ab1        1   604 (39)  C BE495325Sn26P068G06P019C101R1_096.ab1   (40)   604     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  298 nodes

 151 str. conn. components

Path
    1  C BE495325Sn26P068G06P019C101R1_096.ab1   644 
   44    BE495325Sn26P068G06P019C101F1_096.ab1     4 
  232  C BE495325Sn26P068G06P019C101R1_096.ab1   413 
  240    BE495325Sn26P068G06P019C101F1_096.ab1   200 
  248  C BE495325Sn26P068G06P019C101R1_096.ab1   397 
  260    BE495325Sn26P068G06P019C101F1_096.ab1   220 
  264  C BE495325Sn26P068G06P019C101R1_096.ab1   381 
  272    BE495325Sn26P068G06P019C101F1_096.ab1   232 
  284  C BE495325Sn26P068G06P019C101R1_096.ab1   361 
  296    BE495325Sn26P068G06P019C101F1_096.ab1   256 
  308  C BE495325Sn26P068G06P019C101R1_096.ab1   337 
  312    BE495325Sn26P068G06P019C101F1_096.ab1   272 
  320  C BE495325Sn26P068G06P019C101R1_096.ab1   325 
  324    BE495325Sn26P068G06P019C101F1_096.ab1   284 
  328  C BE495325Sn26P068G06P019C101R1_096.ab1   317 
  336    BE495325Sn26P068G06P019C101F1_096.ab1   296 
  340  C BE495325Sn26P068G06P019C101R1_096.ab1   305 
  348    BE495325Sn26P068G06P019C101F1_096.ab1   308 
  356  C BE495325Sn26P068G06P019C101R1_096.ab1   289 
  360    BE495325Sn26P068G06P019C101F1_096.ab1   320 
  364  C BE495325Sn26P068G06P019C101R1_096.ab1   281 
  596    BE495325Sn26P068G06P019C101F1_096.ab1   556 
  605  C BE495325Sn26P068G06P019C101R1_096.ab1    40 
  638    BE495325Sn26P068G06P019C101F1_096.ab1   598 
Contig length: old 683, new 683

Contig length: old 683, new 683
New start: 0