No. words: 1199; after pruning: 1159


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.2 (1,1:604)  542  0.18 0.00 0.00  BE495325Sn28P068G06P019C101F1_092.ab1        1   553 (0)  C BE495325Sn28P068G06P019C101R1_092.ab1   (41)   605    53 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1  C BE495325Sn28P068G06P019C101R1_092.ab1   646 
   45    BE495325Sn28P068G06P019C101F1_092.ab1     4 
   81  C BE495325Sn28P068G06P019C101R1_092.ab1   566 
   85    BE495325Sn28P068G06P019C101F1_092.ab1    44 
  241  C BE495325Sn28P068G06P019C101R1_092.ab1   406 
  257    BE495325Sn28P068G06P019C101F1_092.ab1   216 
  265  C BE495325Sn28P068G06P019C101R1_092.ab1   382 
Contig length: old 646, new 646

Contig length: old 646, new 646
New start: 0