No. words: 1287; after pruning: 1247


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.4 (1,1:603)  595  0.17 0.00 0.00  BE495325Sn30P068G06P019C101F1_088.ab1        1   604 (38)  C BE495325Sn30P068G06P019C101R1_088.ab1   (41)   604     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  300 nodes

 152 str. conn. components

Path
    1  C BE495325Sn30P068G06P019C101R1_088.ab1   645 
   45    BE495325Sn30P068G06P019C101F1_088.ab1     4 
   81  C BE495325Sn30P068G06P019C101R1_088.ab1   565 
   85    BE495325Sn30P068G06P019C101F1_088.ab1    44 
  253  C BE495325Sn30P068G06P019C101R1_088.ab1   393 
  257    BE495325Sn30P068G06P019C101F1_088.ab1   216 
  461  C BE495325Sn30P068G06P019C101R1_088.ab1   185 
  601    BE495325Sn30P068G06P019C101F1_088.ab1   560 
  605  C BE495325Sn30P068G06P019C101R1_088.ab1    41 
  635    BE495325Sn30P068G06P019C101F1_088.ab1   594 
Contig length: old 683, new 683

Contig length: old 683, new 683
New start: 0