No. words: 1281; after pruning: 1241


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:603)  592  0.33 0.00 0.00  BE495325Ta11P068G06P019C101F1_080.ab1        1   604 (33)  C BE495325Ta11P068G06P019C101R1_080.ab1   (40)   604     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  298 nodes

 151 str. conn. components

Path
    1  C BE495325Ta11P068G06P019C101R1_080.ab1   644 
   44    BE495325Ta11P068G06P019C101F1_080.ab1     4 
   80  C BE495325Ta11P068G06P019C101R1_080.ab1   565 
   88    BE495325Ta11P068G06P019C101F1_080.ab1    48 
  180  C BE495325Ta11P068G06P019C101R1_080.ab1   465 
  196    BE495325Ta11P068G06P019C101F1_080.ab1   156 
  252  C BE495325Ta11P068G06P019C101R1_080.ab1   393 
  260    BE495325Ta11P068G06P019C101F1_080.ab1   220 
  448  C BE495325Ta11P068G06P019C101R1_080.ab1   197 
  472    BE495325Ta11P068G06P019C101F1_080.ab1   432 
  480  C BE495325Ta11P068G06P019C101R1_080.ab1   165 
  508    BE495325Ta11P068G06P019C101F1_080.ab1   468 
  520  C BE495325Ta11P068G06P019C101R1_080.ab1   125 
  634    BE495325Ta11P068G06P019C101F1_080.ab1   594 
Contig length: old 677, new 677

Contig length: old 677, new 677
New start: 0