No. words: 1231; after pruning: 1205


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.3 (1,1:613)  572  0.00 0.17 0.00  BE495325Ta12P068G06P019C101F1_078.ab1        1   586 (0)  C BE495325Ta12P068G06P019C101R1_078.ab1   (30)   615    29 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C BE495325Ta12P068G06P019C101R1_078.ab1   645 
   41    BE495325Ta12P068G06P019C101F1_078.ab1    10 
   45  C BE495325Ta12P068G06P019C101R1_078.ab1   601 
   49    BE495325Ta12P068G06P019C101F1_078.ab1    18 
   77  C BE495325Ta12P068G06P019C101R1_078.ab1   569 
   85    BE495325Ta12P068G06P019C101F1_078.ab1    54 
  113  C BE495325Ta12P068G06P019C101R1_078.ab1   533 
  121    BE495325Ta12P068G06P019C101F1_078.ab1    90 
  177  C BE495325Ta12P068G06P019C101R1_078.ab1   469 
  201    BE495325Ta12P068G06P019C101F1_078.ab1   170 
  233  C BE495325Ta12P068G06P019C101R1_078.ab1   413 
Contig length: old 645, new 645

Contig length: old 645, new 645
New start: 0