No. words: 1293; after pruning: 1253


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 12.6 (1,1:611)  600  0.16 0.00 0.00  BE495325Ta13P068G06P019C101F1_076.ab1        4   612 (35)  C BE495325Ta13P068G06P019C101R1_076.ab1   (37)   609     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1  C BE495325Ta13P068G06P019C101R1_076.ab1   646 
   42    BE495325Ta13P068G06P019C101F1_076.ab1     8 
   78  C BE495325Ta13P068G06P019C101R1_076.ab1   569 
   86    BE495325Ta13P068G06P019C101F1_076.ab1    52 
  114  C BE495325Ta13P068G06P019C101R1_076.ab1   533 
  118    BE495325Ta13P068G06P019C101F1_076.ab1    84 
  178  C BE495325Ta13P068G06P019C101R1_076.ab1   469 
  258    BE495325Ta13P068G06P019C101F1_076.ab1   224 
  482  C BE495325Ta13P068G06P019C101R1_076.ab1   165 
  510    BE495325Ta13P068G06P019C101F1_076.ab1   476 
  522  C BE495325Ta13P068G06P019C101R1_076.ab1   125 
  570    BE495325Ta13P068G06P019C101F1_076.ab1   536 
  574  C BE495325Ta13P068G06P019C101R1_076.ab1    73 
  640    BE495325Ta13P068G06P019C101F1_076.ab1   606 
Contig length: old 681, new 681

Contig length: old 681, new 681
New start: 0