No. words: 1295; after pruning: 1255


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 12.6 (1,1:611)  600  0.16 0.00 0.00  BE495325Ta17P068G06P019C101F1_068.ab1        4   612 (39)  C BE495325Ta17P068G06P019C101R1_068.ab1   (35)   609     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1  C BE495325Ta17P068G06P019C101R1_068.ab1   644 
   40    BE495325Ta17P068G06P019C101F1_068.ab1     8 
   44  C BE495325Ta17P068G06P019C101R1_068.ab1   601 
   48    BE495325Ta17P068G06P019C101F1_068.ab1    16 
   76  C BE495325Ta17P068G06P019C101R1_068.ab1   569 
   84    BE495325Ta17P068G06P019C101F1_068.ab1    52 
  252  C BE495325Ta17P068G06P019C101R1_068.ab1   393 
  256    BE495325Ta17P068G06P019C101F1_068.ab1   224 
  328  C BE495325Ta17P068G06P019C101R1_068.ab1   317 
  508    BE495325Ta17P068G06P019C101F1_068.ab1   476 
  512  C BE495325Ta17P068G06P019C101R1_068.ab1   133 
  568    BE495325Ta17P068G06P019C101F1_068.ab1   536 
  572  C BE495325Ta17P068G06P019C101R1_068.ab1    73 
  634    BE495325Ta17P068G06P019C101F1_068.ab1   602 
Contig length: old 683, new 683

Contig length: old 683, new 683
New start: 0