No. words: 1295; after pruning: 1255


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 12.5 (1,1:611)  600  0.16 0.00 0.00  BE495325Ta19P068G06P019C101F1_095.ab1        4   612 (38)  C BE495325Ta19P068G06P019C101R1_095.ab1   (36)   609     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1  C BE495325Ta19P068G06P019C101R1_095.ab1   645 
   41    BE495325Ta19P068G06P019C101F1_095.ab1     8 
   77  C BE495325Ta19P068G06P019C101R1_095.ab1   569 
   85    BE495325Ta19P068G06P019C101F1_095.ab1    52 
  461  C BE495325Ta19P068G06P019C101R1_095.ab1   185 
  509    BE495325Ta19P068G06P019C101F1_095.ab1   476 
  513  C BE495325Ta19P068G06P019C101R1_095.ab1   133 
  593    BE495325Ta19P068G06P019C101F1_095.ab1   560 
  597  C BE495325Ta19P068G06P019C101R1_095.ab1    49 
  639    BE495325Ta19P068G06P019C101F1_095.ab1   606 
Contig length: old 683, new 683

Contig length: old 683, new 683
New start: 0