No. words: 935; after pruning: 909


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 5.8 (1,1:305)  293  0.33 0.00 0.00  BE495766Ld06P026A08P026E101F1_010.ab1        5   306 (149)  C BE495766Ld06P026A08P026E101R1_010.ab1   (178)   302     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  150 nodes

 77 str. conn. components

Path
    1  C BE495766Ld06P026A08P026E101R1_010.ab1   480 
  214    BE495766Ld06P026A08P026E101F1_010.ab1    40 
  249  C BE495766Ld06P026A08P026E101R1_010.ab1   232 
  253    BE495766Ld06P026A08P026E101F1_010.ab1    79 
  261  C BE495766Ld06P026A08P026E101R1_010.ab1   220 
  269    BE495766Ld06P026A08P026E101F1_010.ab1    95 
Contig length: old 629, new 629

Contig length: old 629, new 629
New start: 0