No. words: 909; after pruning: 883


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.2 (1,1:278)  274  0.00 0.00 0.00  BE495766Ld08P026A08P026E101F1_006.ab1        1   279 (150)  C BE495766Ld08P026A08P026E101R1_006.ab1   (201)   279     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  142 nodes

 73 str. conn. components

Path
    1  C BE495766Ld08P026A08P026E101R1_006.ab1   480 
  385    BE495766Ld08P026A08P026E101F1_006.ab1   184 
  401  C BE495766Ld08P026A08P026E101R1_006.ab1    80 
  421    BE495766Ld08P026A08P026E101F1_006.ab1   220 
Contig length: old 630, new 630

Contig length: old 630, new 630
New start: 0