No. words: 1540; after pruning: 1514


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 1.8 (1,1:772)  646  4.11 0.13 0.00  BE496932At01P129C05P129D111F1_095.ab1        1   754 (1)  C BE496932At01P129C05P129D111R1_095.ab1   (11)   774    20 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  286 nodes

 145 str. conn. components

Path
    1  C BE496932At01P129C05P129D111R1_095.ab1   785 
   15    BE496932At01P129C05P129D111F1_095.ab1     4 
  548  C BE496932At01P129C05P129D111R1_095.ab1   237 
Contig length: old 785, new 784

Contig length: old 784, new 784
New start: 0