No. words: 500; after pruning: 474


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -0.1 -0.1 (1,1:206)  187  0.00 0.00 0.97  BE496983Ta24P053A02P053B021F1_049.ab1        1   207 (34)  C BE496983Ta24P053A02P053B021R1_049.ab1   (53)   206     2 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.1       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  96 nodes

 50 str. conn. components

Path
    1  C BE496983Ta24P053A02P053B021R1_049.ab1   259 
   85    BE496983Ta24P053A02P053B021F1_049.ab1    32 
   97  C BE496983Ta24P053A02P053B021R1_049.ab1   163 
  109    BE496983Ta24P053A02P053B021F1_049.ab1    56 
  141  C BE496983Ta24P053A02P053B021R1_049.ab1   119 
  149    BE496983Ta24P053A02P053B021F1_049.ab1    96 
  173  C BE496983Ta24P053A02P053B021R1_049.ab1    87 
  177    BE496983Ta24P053A02P053B021F1_049.ab1   124 
  185  C BE496983Ta24P053A02P053B021R1_049.ab1    75 
  189    BE496983Ta24P053A02P053B021F1_049.ab1   136 
  201  C BE496983Ta24P053A02P053B021R1_049.ab1    59 
  213    BE496983Ta24P053A02P053B021F1_049.ab1   160 
Contig length: old 293, new 294

Contig length: old 294, new 294
New start: 0