No. words: 521; after pruning: 495


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    8    0.0 0.9 (1,1:215)  187  0.00 0.00 0.96  BE496983Td09P053A02P053B021F1_048.ab1        9   216 (47)  C BE496983Td09P053A02P053B021R1_048.ab1   (51)   207     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 8       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  96 nodes

 50 str. conn. components

Path
    1  C BE496983Td09P053A02P053B021R1_048.ab1   258 
   99    BE496983Td09P053A02P053B021F1_048.ab1    56 
  103  C BE496983Td09P053A02P053B021R1_048.ab1   156 
  107    BE496983Td09P053A02P053B021F1_048.ab1    64 
  111  C BE496983Td09P053A02P053B021R1_048.ab1   148 
  115    BE496983Td09P053A02P053B021F1_048.ab1    72 
  139  C BE496983Td09P053A02P053B021R1_048.ab1   120 
  143    BE496983Td09P053A02P053B021F1_048.ab1   100 
  147  C BE496983Td09P053A02P053B021R1_048.ab1   112 
  151    BE496983Td09P053A02P053B021F1_048.ab1   108 
  155  C BE496983Td09P053A02P053B021R1_048.ab1   104 
  159    BE496983Td09P053A02P053B021F1_048.ab1   116 
Contig length: old 305, new 306

Contig length: old 306, new 306
New start: 0