No. words: 779; after pruning: 753


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 1.9 (1,1:467)  262  3.34 0.00 0.33  BE497169As02P103B05P103B111F1_056.ab1      170   468 (12)  C BE497169As02P103B05P103B111R1_056.ab1   (0)   299     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  126 nodes

 65 str. conn. components

Path
    1    BE497169As02P103B05P103B111F1_056.ab1     1 
  285  C BE497169As02P103B05P103B111R1_056.ab1   184 
  297    BE497169As02P103B05P103B111F1_056.ab1   297 
  305  C BE497169As02P103B05P103B111R1_056.ab1   164 
  325    BE497169As02P103B05P103B111F1_056.ab1   325 
  329  C BE497169As02P103B05P103B111R1_056.ab1   140 
  365    BE497169As02P103B05P103B111F1_056.ab1   365 
  382  C BE497169As02P103B05P103B111R1_056.ab1    87 
  400    BE497169As02P103B05P103B111F1_056.ab1   400 
  420  C BE497169As02P103B05P103B111R1_056.ab1    49 
  453    BE497169As02P103B05P103B111F1_056.ab1   454 
  457  C BE497169As02P103B05P103B111R1_056.ab1    12 
  461    BE497169As02P103B05P103B111F1_056.ab1   462 
Contig length: old 480, new 479

Contig length: old 479, new 480
New start: 0 
I Change at: 452; seg lengths: entry 1, contig 0