No. words: 1193; after pruning: 1167


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.2 (1,1:463)  452  0.00 0.22 0.22  BE497169Ld02P103B05P103B111F1_010.ab1        1   464 (146)  C BE497169Ld02P103B05P103B111R1_010.ab1   (119)   464     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C BE497169Ld02P103B05P103B111R1_010.ab1   583 
  412    BE497169Ld02P103B05P103B111F1_010.ab1   292 
  440  C BE497169Ld02P103B05P103B111R1_010.ab1   144 
  444    BE497169Ld02P103B05P103B111F1_010.ab1   324 
  468  C BE497169Ld02P103B05P103B111R1_010.ab1   116 
  484    BE497169Ld02P103B05P103B111F1_010.ab1   364 
  496  C BE497169Ld02P103B05P103B111R1_010.ab1    88 
  500    BE497169Ld02P103B05P103B111F1_010.ab1   380 
  504  C BE497169Ld02P103B05P103B111R1_010.ab1    80 
  516    BE497169Ld02P103B05P103B111F1_010.ab1   396 
  528  C BE497169Ld02P103B05P103B111R1_010.ab1    56 
  532    BE497169Ld02P103B05P103B111F1_010.ab1   412 
  544  C BE497169Ld02P103B05P103B111R1_010.ab1    40 
  552    BE497169Ld02P103B05P103B111F1_010.ab1   432 
Contig length: old 729, new 730

Contig length: old 730, new 730
New start: 0