No. words: 1202; after pruning: 1176


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.1 (1,1:470)  453  0.00 0.00 0.64  BE497169Ld04P103B05P103B111F1_006.ab1        1   471 (135)  C BE497169Ld04P103B05P103B111R1_006.ab1   (126)   470     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  226 nodes

 115 str. conn. components

Path
    1  C BE497169Ld04P103B05P103B111R1_006.ab1   596 
  434    BE497169Ld04P103B05P103B111F1_006.ab1   308 
  442  C BE497169Ld04P103B05P103B111R1_006.ab1   155 
  486    BE497169Ld04P103B05P103B111F1_006.ab1   360 
  506  C BE497169Ld04P103B05P103B111R1_006.ab1    91 
  514    BE497169Ld04P103B05P103B111F1_006.ab1   388 
  522  C BE497169Ld04P103B05P103B111R1_006.ab1    75 
  534    BE497169Ld04P103B05P103B111F1_006.ab1   408 
  546  C BE497169Ld04P103B05P103B111R1_006.ab1    51 
  550    BE497169Ld04P103B05P103B111F1_006.ab1   424 
Contig length: old 731, new 732

Contig length: old 732, new 732
New start: 0