No. words: 1182; after pruning: 1156


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.1 (1,1:450)  443  0.00 0.00 0.22  BE497169Ld05P103B05P103B111F1_004.ab1        1   451 (130)  C BE497169Ld05P103B05P103B111R1_004.ab1   (151)   450     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1  C BE497169Ld05P103B05P103B111R1_004.ab1   601 
  431    BE497169Ld05P103B05P103B111F1_004.ab1   280 
  467  C BE497169Ld05P103B05P103B111R1_004.ab1   135 
  475    BE497169Ld05P103B05P103B111F1_004.ab1   324 
  479  C BE497169Ld05P103B05P103B111R1_004.ab1   123 
  503    BE497169Ld05P103B05P103B111F1_004.ab1   352 
  523  C BE497169Ld05P103B05P103B111R1_004.ab1    79 
  535    BE497169Ld05P103B05P103B111F1_004.ab1   384 
  539  C BE497169Ld05P103B05P103B111R1_004.ab1    63 
  543    BE497169Ld05P103B05P103B111F1_004.ab1   392 
  547  C BE497169Ld05P103B05P103B111R1_004.ab1    55 
  551    BE497169Ld05P103B05P103B111F1_004.ab1   400 
  559  C BE497169Ld05P103B05P103B111R1_004.ab1    43 
  571    BE497169Ld05P103B05P103B111F1_004.ab1   420 
Contig length: old 731, new 732

Contig length: old 732, new 732
New start: 0