No. words: 1166; after pruning: 1140


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.6 (1,1:436)  425  0.00 0.23 0.23  BE497169Ld06P103B05P103B111F1_002.ab1        1   437 (143)  C BE497169Ld06P103B05P103B111R1_002.ab1   (149)   437     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  214 nodes

 109 str. conn. components

Path
    1  C BE497169Ld06P103B05P103B111R1_002.ab1   586 
  449    BE497169Ld06P103B05P103B111F1_002.ab1   299 
  465  C BE497169Ld06P103B05P103B111R1_002.ab1   122 
  501    BE497169Ld06P103B05P103B111F1_002.ab1   351 
  509  C BE497169Ld06P103B05P103B111R1_002.ab1    78 
  513    BE497169Ld06P103B05P103B111F1_002.ab1   363 
  521  C BE497169Ld06P103B05P103B111R1_002.ab1    66 
  533    BE497169Ld06P103B05P103B111F1_002.ab1   383 
  541  C BE497169Ld06P103B05P103B111R1_002.ab1    46 
  549    BE497169Ld06P103B05P103B111F1_002.ab1   399 
  557  C BE497169Ld06P103B05P103B111R1_002.ab1    30 
  561    BE497169Ld06P103B05P103B111F1_002.ab1   411 
Contig length: old 729, new 730

Contig length: old 730, new 730
New start: 0