No. words: 1173; after pruning: 1147


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:442)  440  0.00 0.00 0.00  BE497169Ld09P103B05P103B111F1_027.ab1        1   443 (154)  C BE497169Ld09P103B05P103B111R1_027.ab1   (133)   443     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1  C BE497169Ld09P103B05P103B111R1_027.ab1   576 
  197    BE497169Ld09P103B05P103B111F1_027.ab1    64 
  205  C BE497169Ld09P103B05P103B111R1_027.ab1   372 
  269    BE497169Ld09P103B05P103B111F1_027.ab1   136 
  317  C BE497169Ld09P103B05P103B111R1_027.ab1   260 
  405    BE497169Ld09P103B05P103B111F1_027.ab1   272 
  469  C BE497169Ld09P103B05P103B111R1_027.ab1   108 
  485    BE497169Ld09P103B05P103B111F1_027.ab1   352 
  505  C BE497169Ld09P103B05P103B111R1_027.ab1    72 
  513    BE497169Ld09P103B05P103B111F1_027.ab1   380 
  525  C BE497169Ld09P103B05P103B111R1_027.ab1    52 
  533    BE497169Ld09P103B05P103B111F1_027.ab1   400 
  541  C BE497169Ld09P103B05P103B111R1_027.ab1    36 
  545    BE497169Ld09P103B05P103B111F1_027.ab1   412 
Contig length: old 730, new 730

Contig length: old 730, new 730
New start: 0