No. words: 1194; after pruning: 1168


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.1 (1,1:462)  442  0.00 0.22 0.65  BE497169Ld10P103B05P103B111F1_025.ab1        1   463 (117)  C BE497169Ld10P103B05P103B111R1_025.ab1   (151)   463     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1  C BE497169Ld10P103B05P103B111R1_025.ab1   614 
  231    BE497169Ld10P103B05P103B111F1_025.ab1    79 
  239  C BE497169Ld10P103B05P103B111R1_025.ab1   376 
  423    BE497169Ld10P103B05P103B111F1_025.ab1   271 
  487  C BE497169Ld10P103B05P103B111R1_025.ab1   128 
  503    BE497169Ld10P103B05P103B111F1_025.ab1   351 
  523  C BE497169Ld10P103B05P103B111R1_025.ab1    92 
  531    BE497169Ld10P103B05P103B111F1_025.ab1   379 
  547  C BE497169Ld10P103B05P103B111R1_025.ab1    68 
  551    BE497169Ld10P103B05P103B111F1_025.ab1   399 
  555  C BE497169Ld10P103B05P103B111R1_025.ab1    60 
  563    BE497169Ld10P103B05P103B111F1_025.ab1   411 
  567  C BE497169Ld10P103B05P103B111R1_025.ab1    48 
  571    BE497169Ld10P103B05P103B111F1_025.ab1   419 
Contig length: old 731, new 732

Contig length: old 732, new 732
New start: 0