No. words: 1059; after pruning: 1033


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    9    0.0 9.7 (1,1:495)  470  0.41 0.00 0.00  BE497804As02P067C06P067C121F1_032.ab1        1   487 (55)  C BE497804As02P067C06P067C121R1_032.ab1   (21)   496    10 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 9       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C BE497804As02P067C06P067C121R1_032.ab1   517 
   25    BE497804As02P067C06P067C121F1_032.ab1     4 
  179  C BE497804As02P067C06P067C121R1_032.ab1   339 
  183    BE497804As02P067C06P067C121F1_032.ab1   162 
  203  C BE497804As02P067C06P067C121R1_032.ab1   315 
  219    BE497804As02P067C06P067C121F1_032.ab1   198 
  223  C BE497804As02P067C06P067C121R1_032.ab1   295 
  227    BE497804As02P067C06P067C121F1_032.ab1   206 
  243  C BE497804As02P067C06P067C121R1_032.ab1   275 
  251    BE497804As02P067C06P067C121F1_032.ab1   230 
  343  C BE497804As02P067C06P067C121R1_032.ab1   175 
  427    BE497804As02P067C06P067C121F1_032.ab1   406 
  431  C BE497804As02P067C06P067C121R1_032.ab1    87 
  503    BE497804As02P067C06P067C121F1_032.ab1   482 
Contig length: old 563, new 563

Contig length: old 563, new 563
New start: 0