No. words: 1359; after pruning: 1333


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.0 (1,1:1019)  324  0.29 0.00 0.29  BE498761At01P003H05H111F1_13.ab1      314   653 (0)  C BE498761At01P003H05H111R1_13.ab1   (0)   706   368 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  162 nodes

 83 str. conn. components

Path
    1    BE498761At01P003H05H111F1_13.ab1     1 
  451  C BE498761At01P003H05H111R1_13.ab1   570 
  459    BE498761At01P003H05H111F1_13.ab1   459 
  511  C BE498761At01P003H05H111R1_13.ab1   510 
  515    BE498761At01P003H05H111F1_13.ab1   515 
  531  C BE498761At01P003H05H111R1_13.ab1   490 
Contig length: old 1020, new 1020

Contig length: old 1020, new 1020
New start: 0