No. words: 1350; after pruning: 1310


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.0 (1,1:1024)  311  0.31 0.00 0.31  BE498761At02P003H05H111F1_14.ab1      332   657 (0)  C BE498761At02P003H05H111R1_14.ab1   (0)   693   369 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  158 nodes

 81 str. conn. components

Path
    1    BE498761At02P003H05H111F1_14.ab1     1 
  455  C BE498761At02P003H05H111R1_14.ab1   571 
  463    BE498761At02P003H05H111F1_14.ab1   463 
  483  C BE498761At02P003H05H111R1_14.ab1   543 
  487    BE498761At02P003H05H111F1_14.ab1   487 
  535  C BE498761At02P003H05H111R1_14.ab1   491 
  543    BE498761At02P003H05H111F1_14.ab1   543 
  560  C BE498761At02P003H05H111R1_14.ab1   466 
  572    BE498761At02P003H05H111F1_14.ab1   572 
  576  C BE498761At02P003H05H111R1_14.ab1   450 
  584    BE498761At02P003H05H111F1_14.ab1   584 
  588  C BE498761At02P003H05H111R1_14.ab1   438 
Contig length: old 1025, new 1025

Contig length: old 1025, new 1025
New start: 0 
S Change at: 679; seg lengths: entry 1, contig 1