No. words: 1649; after pruning: 1623


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 8.0 (1,1:666)  584  1.38 0.15 0.31  BE498786Ld03P103F05P103F111F1_083.ab1        8   660 (152)  C BE498786Ld03P103F05P103F111R1_083.ab1   (177)   660     9 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1  C BE498786Ld03P103F05P103F111R1_083.ab1   837 
  227    BE498786Ld03P103F05P103F111F1_083.ab1    56 
  231  C BE498786Ld03P103F05P103F111R1_083.ab1   607 
  243    BE498786Ld03P103F05P103F111F1_083.ab1    72 
  251  C BE498786Ld03P103F05P103F111R1_083.ab1   587 
  267    BE498786Ld03P103F05P103F111F1_083.ab1    96 
  275  C BE498786Ld03P103F05P103F111R1_083.ab1   563 
  279    BE498786Ld03P103F05P103F111F1_083.ab1   108 
  319  C BE498786Ld03P103F05P103F111R1_083.ab1   519 
  323    BE498786Ld03P103F05P103F111F1_083.ab1   152 
  411  C BE498786Ld03P103F05P103F111R1_083.ab1   427 
  423    BE498786Ld03P103F05P103F111F1_083.ab1   252 
  467  C BE498786Ld03P103F05P103F111R1_083.ab1   371 
  519    BE498786Ld03P103F05P103F111F1_083.ab1   348 
  527  C BE498786Ld03P103F05P103F111R1_083.ab1   311 
  535    BE498786Ld03P103F05P103F111F1_083.ab1   364 
  547  C BE498786Ld03P103F05P103F111R1_083.ab1   291 
  555    BE498786Ld03P103F05P103F111F1_083.ab1   384 
  691  C BE498786Ld03P103F05P103F111R1_083.ab1   147 
  695    BE498786Ld03P103F05P103F111F1_083.ab1   524 
Contig length: old 982, new 983

Contig length: old 983, new 983
New start: 0