No. words: 1754; after pruning: 1714


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.5 (1,1:729)  692  0.14 0.14 0.14  BE498786Ld07P103F05P103F111F1_090.ab1        1   730 (146)  C BE498786Ld07P103F05P103F111R1_090.ab1   (148)   730     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1  C BE498786Ld07P103F05P103F111R1_090.ab1   878 
  164    BE498786Ld07P103F05P103F111F1_090.ab1    15 
  168  C BE498786Ld07P103F05P103F111R1_090.ab1   711 
  194    BE498786Ld07P103F05P103F111F1_090.ab1    45 
  198  C BE498786Ld07P103F05P103F111R1_090.ab1   681 
  206    BE498786Ld07P103F05P103F111F1_090.ab1    57 
  210  C BE498786Ld07P103F05P103F111R1_090.ab1   669 
  392    BE498786Ld07P103F05P103F111F1_090.ab1   244 
  396  C BE498786Ld07P103F05P103F111R1_090.ab1   483 
  504    BE498786Ld07P103F05P103F111F1_090.ab1   356 
  516  C BE498786Ld07P103F05P103F111R1_090.ab1   363 
  524    BE498786Ld07P103F05P103F111F1_090.ab1   376 
  548  C BE498786Ld07P103F05P103F111R1_090.ab1   331 
  568    BE498786Ld07P103F05P103F111F1_090.ab1   420 
  756  C BE498786Ld07P103F05P103F111R1_090.ab1   123 
  772    BE498786Ld07P103F05P103F111F1_090.ab1   624 
  812  C BE498786Ld07P103F05P103F111R1_090.ab1    67 
  824    BE498786Ld07P103F05P103F111F1_090.ab1   676 
  844  C BE498786Ld07P103F05P103F111R1_090.ab1    35 
  852    BE498786Ld07P103F05P103F111F1_090.ab1   704 
  860  C BE498786Ld07P103F05P103F111R1_090.ab1    19 
  868    BE498786Ld07P103F05P103F111F1_090.ab1   720 
Contig length: old 1024, new 1024

Contig length: old 1024, new 1024
New start: 0 
S Change at: 919; seg lengths: entry 1, contig 1