No. words: 913; after pruning: 887


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.6 (1,1:299)  290  0.00 0.00 0.00  BE498786Ld08P103F05P103F111F1_088.ab1        1   300 (43)  C BE498786Ld08P103F05P103F111R1_088.ab1   (270)   300     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  152 nodes

 78 str. conn. components

Path
    1  C BE498786Ld08P103F05P103F111R1_088.ab1   570 
  370    BE498786Ld08P103F05P103F111F1_088.ab1   100 
  390  C BE498786Ld08P103F05P103F111R1_088.ab1   181 
  426    BE498786Ld08P103F05P103F111F1_088.ab1   156 
  430  C BE498786Ld08P103F05P103F111R1_088.ab1   141 
  458    BE498786Ld08P103F05P103F111F1_088.ab1   188 
  482  C BE498786Ld08P103F05P103F111R1_088.ab1    89 
  502    BE498786Ld08P103F05P103F111F1_088.ab1   232 
  510  C BE498786Ld08P103F05P103F111R1_088.ab1    61 
  538    BE498786Ld08P103F05P103F111F1_088.ab1   268 
Contig length: old 613, new 613

Contig length: old 613, new 613
New start: 0