No. words: 1077; after pruning: 1051


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.9 (1,1:375)  365  0.27 0.27 0.00  BE499016Ld04P067E06P067E121F1_067.ab1        1   376 (174)  C BE499016Ld04P067E06P067E121R1_067.ab1   (150)   377     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  180 nodes

 92 str. conn. components

Path
    1  C BE499016Ld04P067E06P067E121R1_067.ab1   527 
  241    BE499016Ld04P067E06P067E121F1_067.ab1    90 
  253  C BE499016Ld04P067E06P067E121R1_067.ab1   275 
  289    BE499016Ld04P067E06P067E121F1_067.ab1   138 
  325  C BE499016Ld04P067E06P067E121R1_067.ab1   203 
  345    BE499016Ld04P067E06P067E121F1_067.ab1   194 
  465  C BE499016Ld04P067E06P067E121R1_067.ab1    63 
  469    BE499016Ld04P067E06P067E121F1_067.ab1   318 
Contig length: old 701, new 701

Contig length: old 701, new 701
New start: 0