No. words: 1087; after pruning: 1061


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.6 (1,1:388)  386  0.00 0.00 0.00  BE499016Ld07P067E06P067E121F1_078.ab1        1   389 (162)  C BE499016Ld07P067E06P067E121R1_078.ab1   (147)   389     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  196 nodes

 100 str. conn. components

Path
    1  C BE499016Ld07P067E06P067E121R1_078.ab1   536 
  239    BE499016Ld07P067E06P067E121F1_078.ab1    92 
  255  C BE499016Ld07P067E06P067E121R1_078.ab1   282 
  283    BE499016Ld07P067E06P067E121F1_078.ab1   136 
  323  C BE499016Ld07P067E06P067E121R1_078.ab1   214 
  343    BE499016Ld07P067E06P067E121F1_078.ab1   196 
  463  C BE499016Ld07P067E06P067E121R1_078.ab1    74 
  471    BE499016Ld07P067E06P067E121F1_078.ab1   324 
Contig length: old 698, new 698

Contig length: old 698, new 698
New start: 0