No. words: 1372; after pruning: 1346


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.5 (1,1:524)  511  0.00 0.00 0.19  BE499309Ld01P026F08P026B111F1_085.ab1        1   525 (175)  C BE499309Ld01P026F08P026B111R1_085.ab1   (148)   524     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  260 nodes

 132 str. conn. components

Path
    1  C BE499309Ld01P026F08P026B111R1_085.ab1   672 
  544    BE499309Ld01P026F08P026B111F1_085.ab1   396 
  552  C BE499309Ld01P026F08P026B111R1_085.ab1   121 
  560    BE499309Ld01P026F08P026B111F1_085.ab1   412 
Contig length: old 847, new 848

Contig length: old 848, new 848
New start: 0