No. words: 1336; after pruning: 1310


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.8 (1,1:530)  522  0.00 0.00 0.00  BE499309Ld05P026F08P026B111F1_013.ab1        1   531 (151)  C BE499309Ld05P026F08P026B111R1_013.ab1   (123)   531     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  268 nodes

 136 str. conn. components

Path
    1  C BE499309Ld05P026F08P026B111R1_013.ab1   654 
  163    BE499309Ld05P026F08P026B111F1_013.ab1    40 
  167  C BE499309Ld05P026F08P026B111R1_013.ab1   488 
  383    BE499309Ld05P026F08P026B111F1_013.ab1   260 
  455  C BE499309Ld05P026F08P026B111R1_013.ab1   200 
  491    BE499309Ld05P026F08P026B111F1_013.ab1   368 
  587  C BE499309Ld05P026F08P026B111R1_013.ab1    68 
  599    BE499309Ld05P026F08P026B111F1_013.ab1   476 
  631  C BE499309Ld05P026F08P026B111R1_013.ab1    24 
  635    BE499309Ld05P026F08P026B111F1_013.ab1   512 
Contig length: old 805, new 805

Contig length: old 805, new 805
New start: 0