No. words: 1097; after pruning: 1071


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 4.5 (1,1:514)  483  0.00 0.39 0.58  BE499309Sn29P059H01P026B111F1_024.ab1        4   517 (26)  C BE499309Sn29P059H01P026B111R1_024.ab1   (41)   513     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE499309Sn29P059H01P026B111R1_024.ab1   554 
  115    BE499309Sn29P059H01P026B111F1_024.ab1    75 
  123  C BE499309Sn29P059H01P026B111R1_024.ab1   432 
  131    BE499309Sn29P059H01P026B111F1_024.ab1    91 
  139  C BE499309Sn29P059H01P026B111R1_024.ab1   416 
  179    BE499309Sn29P059H01P026B111F1_024.ab1   139 
  183  C BE499309Sn29P059H01P026B111R1_024.ab1   372 
  215    BE499309Sn29P059H01P026B111F1_024.ab1   175 
  223  C BE499309Sn29P059H01P026B111R1_024.ab1   332 
  227    BE499309Sn29P059H01P026B111F1_024.ab1   187 
  235  C BE499309Sn29P059H01P026B111R1_024.ab1   320 
  387    BE499309Sn29P059H01P026B111F1_024.ab1   347 
  391  C BE499309Sn29P059H01P026B111R1_024.ab1   164 
  443    BE499309Sn29P059H01P026B111F1_024.ab1   403 
  455  C BE499309Sn29P059H01P026B111R1_024.ab1   100 
  459    BE499309Sn29P059H01P026B111F1_024.ab1   419 
  463  C BE499309Sn29P059H01P026B111R1_024.ab1    92 
  491    BE499309Sn29P059H01P026B111F1_024.ab1   451 
  515  C BE499309Sn29P059H01P026B111R1_024.ab1    40 
  519    BE499309Sn29P059H01P026B111F1_024.ab1   479 
Contig length: old 582, new 583

Contig length: old 583, new 583
New start: 0