No. words: 1010; after pruning: 984


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.4 (1,1:424)  417  0.00 0.00 0.00  BE499309Sn30P059H01P026B111F1_022.ab1        1   425 (79)  C BE499309Sn30P059H01P026B111R1_022.ab1   (81)   425     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  214 nodes

 109 str. conn. components

Path
    1  C BE499309Sn30P059H01P026B111R1_022.ab1   506 
  345    BE499309Sn30P059H01P026B111F1_022.ab1   264 
  353  C BE499309Sn30P059H01P026B111R1_022.ab1   154 
  373    BE499309Sn30P059H01P026B111F1_022.ab1   292 
  377  C BE499309Sn30P059H01P026B111R1_022.ab1   130 
  425    BE499309Sn30P059H01P026B111F1_022.ab1   344 
  433  C BE499309Sn30P059H01P026B111R1_022.ab1    74 
  441    BE499309Sn30P059H01P026B111F1_022.ab1   360 
  485  C BE499309Sn30P059H01P026B111R1_022.ab1    22 
  493    BE499309Sn30P059H01P026B111F1_022.ab1   412 
Contig length: old 585, new 585

Contig length: old 585, new 585
New start: 0