No. words: 1091; after pruning: 1065


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   12    0.0 3.6 (1,1:510)  478  0.00 0.20 0.20  BE499309Ta12P059H01P026B111F1_010.ab1        4   499 (45)  C BE499309Ta12P059H01P026B111R1_010.ab1   (39)   508    13 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
12       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE499309Ta12P059H01P026B111R1_010.ab1   547 
   85    BE499309Ta12P059H01P026B111F1_010.ab1    48 
   97  C BE499309Ta12P059H01P026B111R1_010.ab1   451 
  129    BE499309Ta12P059H01P026B111F1_010.ab1    92 
  137  C BE499309Ta12P059H01P026B111R1_010.ab1   411 
  385    BE499309Ta12P059H01P026B111F1_010.ab1   348 
  389  C BE499309Ta12P059H01P026B111R1_010.ab1   159 
  425    BE499309Ta12P059H01P026B111F1_010.ab1   388 
  433  C BE499309Ta12P059H01P026B111R1_010.ab1   115 
  441    BE499309Ta12P059H01P026B111F1_010.ab1   404 
  453  C BE499309Ta12P059H01P026B111R1_010.ab1    95 
  497    BE499309Ta12P059H01P026B111F1_010.ab1   460 
Contig length: old 580, new 581

Contig length: old 581, new 581
New start: 0